Journée Ifremer du Microbiome

Time	Event	(+)
08:30 - 09:00	Welcome - Welcome
09:00 - 09:45	Keynote (Amphitéâtre S \| Centrale Nantes)	(+)
09:00 - 09:45	› A microbial perspective on animal development and behaviour - Thomas Bosch
09:45 - 10:15	Coffee Break
10:15 - 11:15	Morning session 1 (Amphitéâtre S \| Centrale Nantes)	(+)
10:15 - 10:30	› One for all: Impact of phosphorus limitation on membrane remodelling, prey-predator interactions and methane oxidation - Vanessa Prengelova
10:30 - 10:45	› Understanding OsHV-1 µVar transmission dynamics in Pacific oysters through a mechanistic and stochastic SWEIRD Model - Jules Trillaud
10:45 - 11:00	› Influence of feed on the gut microbiota of Grey partridges - Julie Noualhier
11:00 - 11:15	› Membrane switching: key player in Vibrio cholerae and Uronema marinum interaction - Nathan Lorey
11:15 - 11:30	Break
11:30 - 12:30	Morning session 2 (Amphitéâtre S \| Centrale Nantes)	(+)
11:30 - 11:45	› High metabolic versatility and phenotypic heterogeneity in a marine non-cyanobacterial diazotroph - Pauline Crétin
11:45 - 12:00	› Effects of environmental conditions on mutualistic interactions between the ichtyotoxic microalgae Prymnesium parvum and a bacterial community. - Lou Patron
12:00 - 12:15	› Genomic Characterization of Marine Vibrio Species for the Development of Novel Diagnostic Tools - Yannis Moreau
12:15 - 12:30	› Microbial plankton networks complexity increases under river run-off impact - Chloe Mason
12:30 - 14:00	Lunch (Restaurant Ifremer)
14:00 - 15:15	Afternoon session 1 (Amphitéâtre S \| Centrale Nantes)	(+)
14:00 - 14:15	› Coastal microbiome dynamics and anthropogenic pressures: new insights from environmental DNA - Raffaele Siano
14:15 - 14:30	› Manila clam microbiota response to Vibrio tapetis, temperature and antibiotics at tissue level - Cynthia Oliveira
14:30 - 14:45	› Towards the modeling of cross-feeding interactions between the toxic microalga Prymnesium parvum and its microbiome under nutrient stress conditions - Marinna Gaudin
14:45 - 15:00	› Assessment of a microbiome engineering strategy using Lactic Acid Bacteria as bioprotective cultures to delay the spoilage of Gilthead Seabream (Sparus aurata) fillets - Garance Leroy
15:00 - 15:15	› Impact of model foods enriched with quorum sensing autoinducers on the intestinal microbiota : search for a proof of concept in rats - Catherine Michel
15:15 - 15:30	Break
15:30 - 16:45	Afternoon session 2 (Amphitéâtre S \| Centrale Nantes)	(+)
15:30 - 15:45	› FISH, a new tool for in-situ preservation of RNA in tissues of deep-sea mobile fauna - Valérie Cueff-Gauchard
15:45 - 16:00	› Lachnospirales, a new digestive and symbiotic partner for Rimicaris exoculata and Rimicaris chacei ? - Marion Guéganton
16:00 - 16:15	› Norovirus genetic diversity in a watershed scale upstream of oyster-farming sites: the contribution of passive sampling - Antoine Veron
16:15 - 16:30	› Parallel deployment of passive and grab samplers for variant profiling of SARS-CoV-2 in sewers of two French cities - Françoise Vincent-Hubert
16:30 - 16:45	› CRISPR-Cas system diversity in environmental Campylobacter species - Cécile Philippe
16:45 - 17:00	PhD Award and Closure (Amphitéâtre S \| Centrale Nantes)

08:30 - 09:00

Welcome - Welcome

09:00 - 09:45

Keynote (Amphitéâtre S | Centrale Nantes)

(+)

09:00 - 09:45

› A microbial perspective on animal development and behaviour - Thomas Bosch

09:45 - 10:15

Coffee Break

10:15 - 11:15

Morning session 1 (Amphitéâtre S | Centrale Nantes)

(+)

10:15 - 10:30

› One for all: Impact of phosphorus limitation on membrane remodelling, prey-predator interactions and methane oxidation - Vanessa Prengelova

10:30 - 10:45

› Understanding OsHV-1 µVar transmission dynamics in Pacific oysters through a mechanistic and stochastic SWEIRD Model - Jules Trillaud

10:45 - 11:00

› Influence of feed on the gut microbiota of Grey partridges - Julie Noualhier

11:00 - 11:15

› Membrane switching: key player in Vibrio cholerae and Uronema marinum interaction - Nathan Lorey

11:15 - 11:30

Break

11:30 - 12:30

Morning session 2 (Amphitéâtre S | Centrale Nantes)

(+)

11:30 - 11:45

› High metabolic versatility and phenotypic heterogeneity in a marine non-cyanobacterial diazotroph - Pauline Crétin

11:45 - 12:00

› Effects of environmental conditions on mutualistic interactions between the ichtyotoxic microalgae Prymnesium parvum and a bacterial community. - Lou Patron

12:00 - 12:15

› Genomic Characterization of Marine Vibrio Species for the Development of Novel Diagnostic Tools - Yannis Moreau

12:15 - 12:30

› Microbial plankton networks complexity increases under river run-off impact - Chloe Mason

12:30 - 14:00

Lunch (Restaurant Ifremer)

14:00 - 15:15

Afternoon session 1 (Amphitéâtre S | Centrale Nantes)

(+)

14:00 - 14:15

› Coastal microbiome dynamics and anthropogenic pressures: new insights from environmental DNA - Raffaele Siano

14:15 - 14:30

› Manila clam microbiota response to Vibrio tapetis, temperature and antibiotics at tissue level - Cynthia Oliveira

14:30 - 14:45

› Towards the modeling of cross-feeding interactions between the toxic microalga Prymnesium parvum and its microbiome under nutrient stress conditions - Marinna Gaudin

14:45 - 15:00

› Assessment of a microbiome engineering strategy using Lactic Acid Bacteria as bioprotective cultures to delay the spoilage of Gilthead Seabream (Sparus aurata) fillets - Garance Leroy

15:00 - 15:15

› Impact of model foods enriched with quorum sensing autoinducers on the intestinal microbiota : search for a proof of concept in rats - Catherine Michel

15:15 - 15:30

Break

15:30 - 16:45

Afternoon session 2 (Amphitéâtre S | Centrale Nantes)

(+)

15:30 - 15:45

› FISH, a new tool for in-situ preservation of RNA in tissues of deep-sea mobile fauna - Valérie Cueff-Gauchard

15:45 - 16:00

› Lachnospirales, a new digestive and symbiotic partner for Rimicaris exoculata and Rimicaris chacei ? - Marion Guéganton

16:00 - 16:15

› Norovirus genetic diversity in a watershed scale upstream of oyster-farming sites: the contribution of passive sampling - Antoine Veron

16:15 - 16:30

› Parallel deployment of passive and grab samplers for variant profiling of SARS-CoV-2 in sewers of two French cities - Françoise Vincent-Hubert

16:30 - 16:45

› CRISPR-Cas system diversity in environmental Campylobacter species - Cécile Philippe

16:45 - 17:00

PhD Award and Closure (Amphitéâtre S | Centrale Nantes)

Planning